Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
H3f3cP02301 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.39■□□□□ 0.37
H3f3cP02301 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H3f3cP02301 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3f3cP02301 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3f3cP02301 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H3f3cP02301 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.38■□□□□ 0.37
H3f3cP02301 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.38■□□□□ 0.37
H3f3cP02301 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.38■□□□□ 0.37
H3f3cP02301 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H3f3cP02301 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H3f3cP02301 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3f3cP02301 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3f3cP02301 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3f3cP02301 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H3f3cP02301 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H3f3cP02301 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3f3cP02301 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H3f3cP02301 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3f3cP02301 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3f3cP02301 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3f3cP02301 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
H3f3cP02301 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.36■□□□□ 0.37
H3f3cP02301 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H3f3cP02301 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
H3f3cP02301 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3f3cP02301 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3f3cP02301 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.36■□□□□ 0.37
H3f3cP02301 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.35■□□□□ 0.37
H3f3cP02301 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
H3f3cP02301 Gm7143-201ENSMUST00000222811 859 ntBASIC17.35■□□□□ 0.37
H3f3cP02301 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
H3f3cP02301 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3f3cP02301 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
H3f3cP02301 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
H3f3cP02301 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
H3f3cP02301 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.34■□□□□ 0.37
H3f3cP02301 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3cP02301 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3cP02301 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3cP02301 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3cP02301 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
H3f3cP02301 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3f3cP02301 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H3f3cP02301 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H3f3cP02301 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.33■□□□□ 0.37
H3f3cP02301 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.33■□□□□ 0.36
H3f3cP02301 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.33■□□□□ 0.36
H3f3cP02301 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
H3f3cP02301 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.33■□□□□ 0.36
H3f3cP02301 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3cP02301 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3cP02301 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3cP02301 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3cP02301 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H3f3cP02301 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.33■□□□□ 0.36
H3f3cP02301 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
H3f3cP02301 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
H3f3cP02301 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.32■□□□□ 0.36
H3f3cP02301 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
H3f3cP02301 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3f3cP02301 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Gm9870-201ENSMUST00000063874 645 ntBASIC17.31■□□□□ 0.36
H3f3cP02301 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3f3cP02301 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
H3f3cP02301 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3cP02301 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3cP02301 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3f3cP02301 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms