Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hbb-b1P02088 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hbb-b1P02088 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hbb-b1P02088 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hbb-b1P02088 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.33□□□□□ -0.12
Hbb-b1P02088 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.33□□□□□ -0.12
Hbb-b1P02088 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hbb-b1P02088 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hbb-b1P02088 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Gm24970-201ENSMUST00000175582 82 ntBASIC14.31□□□□□ -0.12
Hbb-b1P02088 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hbb-b1P02088 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hbb-b1P02088 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Hbb-b1P02088 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.29□□□□□ -0.12
Hbb-b1P02088 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.29□□□□□ -0.12
Hbb-b1P02088 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.29□□□□□ -0.12
Hbb-b1P02088 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.29□□□□□ -0.12
Hbb-b1P02088 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hbb-b1P02088 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms