Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdha4O88689 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdha4O88689 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdha4O88689 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdha4O88689 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.77■■□□□ 1.24
Pcdha4O88689 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.77■■□□□ 1.24
Pcdha4O88689 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.77■■□□□ 1.24
Pcdha4O88689 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdha4O88689 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdha4O88689 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdha4O88689 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pcdha4O88689 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdha4O88689 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Pcdha4O88689 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdha4O88689 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.76■■□□□ 1.23
Pcdha4O88689 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.76■■□□□ 1.23
Pcdha4O88689 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdha4O88689 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdha4O88689 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.75■■□□□ 1.23
Pcdha4O88689 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.75■■□□□ 1.23
Pcdha4O88689 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdha4O88689 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdha4O88689 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdha4O88689 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdha4O88689 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdha4O88689 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.74■■□□□ 1.23
Pcdha4O88689 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdha4O88689 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdha4O88689 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Pcdha4O88689 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.74■■□□□ 1.23
Pcdha4O88689 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Pcdha4O88689 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdha4O88689 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdha4O88689 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.73■■□□□ 1.23
Pcdha4O88689 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
Pcdha4O88689 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdha4O88689 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdha4O88689 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdha4O88689 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.73■■□□□ 1.23
Pcdha4O88689 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdha4O88689 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdha4O88689 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdha4O88689 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
Pcdha4O88689 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Pcdha4O88689 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdha4O88689 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.73■■□□□ 1.23
Pcdha4O88689 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.72■■□□□ 1.23
Pcdha4O88689 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pcdha4O88689 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdha4O88689 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.71■■□□□ 1.23
Pcdha4O88689 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.71■■□□□ 1.23
Pcdha4O88689 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Pcdha4O88689 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdha4O88689 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdha4O88689 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Pcdha4O88689 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdha4O88689 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdha4O88689 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.7■■□□□ 1.22
Pcdha4O88689 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdha4O88689 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdha4O88689 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdha4O88689 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdha4O88689 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdha4O88689 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Pcdha4O88689 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdha4O88689 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Pcdha4O88689 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
Pcdha4O88689 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdha4O88689 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdha4O88689 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdha4O88689 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Pcdha4O88689 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdha4O88689 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdha4O88689 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdha4O88689 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdha4O88689 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdha4O88689 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdha4O88689 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdha4O88689 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdha4O88689 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdha4O88689 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdha4O88689 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdha4O88689 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Pcdha4O88689 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdha4O88689 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdha4O88689 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms