Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kcnu1O54982 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kcnu1O54982 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kcnu1O54982 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Kcnu1O54982 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Kcnu1O54982 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kcnu1O54982 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kcnu1O54982 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.72■■□□□ 1.07
Kcnu1O54982 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kcnu1O54982 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kcnu1O54982 Gm40881-201ENSMUST00000223397 166 ntBASIC21.72■■□□□ 1.07
Kcnu1O54982 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.72■■□□□ 1.07
Kcnu1O54982 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Kcnu1O54982 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.71■■□□□ 1.07
Kcnu1O54982 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kcnu1O54982 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.71■■□□□ 1.07
Kcnu1O54982 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Kcnu1O54982 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.71■■□□□ 1.07
Kcnu1O54982 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.71■■□□□ 1.07
Kcnu1O54982 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.71■■□□□ 1.07
Kcnu1O54982 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Kcnu1O54982 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.71■■□□□ 1.07
Kcnu1O54982 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Kcnu1O54982 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kcnu1O54982 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.7■■□□□ 1.06
Kcnu1O54982 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kcnu1O54982 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kcnu1O54982 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kcnu1O54982 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kcnu1O54982 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Kcnu1O54982 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.7■■□□□ 1.06
Kcnu1O54982 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kcnu1O54982 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kcnu1O54982 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Kcnu1O54982 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Kcnu1O54982 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kcnu1O54982 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kcnu1O54982 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kcnu1O54982 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.68■■□□□ 1.06
Kcnu1O54982 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kcnu1O54982 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kcnu1O54982 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Kcnu1O54982 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kcnu1O54982 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Kcnu1O54982 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Kcnu1O54982 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.67■■□□□ 1.06
Kcnu1O54982 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Kcnu1O54982 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.67■■□□□ 1.06
Kcnu1O54982 Gm15820-201ENSMUST00000201566 728 ntBASIC21.67■■□□□ 1.06
Kcnu1O54982 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.67■■□□□ 1.06
Kcnu1O54982 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Kcnu1O54982 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Kcnu1O54982 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Kcnu1O54982 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.66■■□□□ 1.06
Kcnu1O54982 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.66■■□□□ 1.06
Kcnu1O54982 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.66■■□□□ 1.06
Kcnu1O54982 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Kcnu1O54982 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.65■■□□□ 1.06
Kcnu1O54982 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Kcnu1O54982 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
Kcnu1O54982 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Kcnu1O54982 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.65■■□□□ 1.06
Kcnu1O54982 Gm5812-201ENSMUST00000061073 957 ntBASIC21.65■■□□□ 1.06
Kcnu1O54982 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Kcnu1O54982 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Kcnu1O54982 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Kcnu1O54982 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Kcnu1O54982 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Kcnu1O54982 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Kcnu1O54982 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.64■■□□□ 1.05
Kcnu1O54982 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.64■■□□□ 1.05
Kcnu1O54982 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Kcnu1O54982 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Kcnu1O54982 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Kcnu1O54982 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Kcnu1O54982 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Kcnu1O54982 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Kcnu1O54982 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Kcnu1O54982 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Kcnu1O54982 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Kcnu1O54982 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Kcnu1O54982 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Kcnu1O54982 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Kcnu1O54982 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms