Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-3J3QMG8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Gm14117-201ENSMUST00000122417 843 ntBASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Gm45102-201ENSMUST00000207427 857 ntBASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-3J3QMG8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Rps24-207ENSMUST00000224568 714 ntBASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-3J3QMG8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-3J3QMG8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-3J3QMG8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.88■□□□□ 0.45
Trav13d-3J3QMG8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-3J3QMG8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-3J3QMG8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-3J3QMG8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13d-3J3QMG8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Gm22238-201ENSMUST00000175222 88 ntBASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav13d-3J3QMG8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Gm9870-201ENSMUST00000063874 645 ntBASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav13d-3J3QMG8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav13d-3J3QMG8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trav13d-3J3QMG8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13d-3J3QMG8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav13d-3J3QMG8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13d-3J3QMG8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13d-3J3QMG8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.83■□□□□ 0.44
Trav13d-3J3QMG8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13d-3J3QMG8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13d-3J3QMG8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13d-3J3QMG8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms