Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm10477F6SW83 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm10477F6SW83 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Gm10477F6SW83 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm10477F6SW83 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Gm10477F6SW83 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm10477F6SW83 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm10477F6SW83 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Gm10477F6SW83 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm10477F6SW83 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Gm10477F6SW83 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Gm45364-201ENSMUST00000210883 159 ntBASIC18.82■□□□□ 0.6
Gm10477F6SW83 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm10477F6SW83 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm10477F6SW83 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm10477F6SW83 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm10477F6SW83 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm10477F6SW83 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm10477F6SW83 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm10477F6SW83 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gm10477F6SW83 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm10477F6SW83 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms