Protein–RNA interactions for Protein: E9Q5E2

BC005561, cDNA sequence BC005561, mousemouse

Predictions only

Length 1,589 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC005561E9Q5E2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
BC005561E9Q5E2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
BC005561E9Q5E2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
BC005561E9Q5E2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
BC005561E9Q5E2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
BC005561E9Q5E2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
BC005561E9Q5E2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
BC005561E9Q5E2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
BC005561E9Q5E2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
BC005561E9Q5E2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC31.95■■■□□ 2.71
BC005561E9Q5E2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
BC005561E9Q5E2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BC005561E9Q5E2 Gm42778-201ENSMUST00000199644 553 ntBASIC31.94■■■□□ 2.7
BC005561E9Q5E2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BC005561E9Q5E2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
BC005561E9Q5E2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC31.94■■■□□ 2.7
BC005561E9Q5E2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
BC005561E9Q5E2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Ap3s1-204ENSMUST00000225520 957 ntBASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BC005561E9Q5E2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
BC005561E9Q5E2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
BC005561E9Q5E2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
BC005561E9Q5E2 Gm27045-201ENSMUST00000182145 1402 ntBASIC31.92■■■□□ 2.7
BC005561E9Q5E2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
BC005561E9Q5E2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
BC005561E9Q5E2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
BC005561E9Q5E2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
BC005561E9Q5E2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC31.9■■■□□ 2.7
BC005561E9Q5E2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
BC005561E9Q5E2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC31.9■■■□□ 2.7
BC005561E9Q5E2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BC005561E9Q5E2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC31.89■■■□□ 2.7
BC005561E9Q5E2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC31.88■■■□□ 2.69
BC005561E9Q5E2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
BC005561E9Q5E2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
BC005561E9Q5E2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
BC005561E9Q5E2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
BC005561E9Q5E2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC31.87■■■□□ 2.69
BC005561E9Q5E2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC31.87■■■□□ 2.69
BC005561E9Q5E2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
BC005561E9Q5E2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
BC005561E9Q5E2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Gm14281-201ENSMUST00000121700 1294 ntBASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Gm44949-201ENSMUST00000206423 1450 ntBASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
BC005561E9Q5E2 Gm12441-201ENSMUST00000121806 588 ntBASIC31.85■■■□□ 2.69
BC005561E9Q5E2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
BC005561E9Q5E2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC31.85■■■□□ 2.69
BC005561E9Q5E2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
BC005561E9Q5E2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
BC005561E9Q5E2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC31.85■■■□□ 2.69
BC005561E9Q5E2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
BC005561E9Q5E2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
BC005561E9Q5E2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
BC005561E9Q5E2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC31.84■■■□□ 2.69
BC005561E9Q5E2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
BC005561E9Q5E2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
BC005561E9Q5E2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
BC005561E9Q5E2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
BC005561E9Q5E2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
BC005561E9Q5E2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
BC005561E9Q5E2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
BC005561E9Q5E2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
BC005561E9Q5E2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
BC005561E9Q5E2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC31.83■■■□□ 2.69
BC005561E9Q5E2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC31.83■■■□□ 2.69
BC005561E9Q5E2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
BC005561E9Q5E2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.69
BC005561E9Q5E2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
BC005561E9Q5E2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
BC005561E9Q5E2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
BC005561E9Q5E2 Gm13234-201ENSMUST00000120010 747 ntBASIC31.81■■■□□ 2.68
BC005561E9Q5E2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BC005561E9Q5E2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC31.81■■■□□ 2.68
BC005561E9Q5E2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
BC005561E9Q5E2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BC005561E9Q5E2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
BC005561E9Q5E2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms