Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm11127A7VMS2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm11127A7VMS2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Gm10420-201ENSMUST00000121713 882 ntBASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm11127A7VMS2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm11127A7VMS2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm11127A7VMS2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm11127A7VMS2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm11127A7VMS2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.85■□□□□ 0.45
Gm11127A7VMS2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm11127A7VMS2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Gm11127A7VMS2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm11127A7VMS2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm11127A7VMS2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Gm11127A7VMS2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Gm11127A7VMS2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm11127A7VMS2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Gm11127A7VMS2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm11127A7VMS2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm11127A7VMS2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.83■□□□□ 0.45
Gm11127A7VMS2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm11127A7VMS2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm11127A7VMS2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm11127A7VMS2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Gm11127A7VMS2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms