Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
IsxA1A546 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IsxA1A546 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IsxA1A546 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.84■□□□□ 0.61
IsxA1A546 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IsxA1A546 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.84■□□□□ 0.61
IsxA1A546 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IsxA1A546 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IsxA1A546 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IsxA1A546 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IsxA1A546 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
IsxA1A546 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IsxA1A546 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
IsxA1A546 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
IsxA1A546 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IsxA1A546 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
IsxA1A546 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IsxA1A546 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IsxA1A546 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IsxA1A546 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IsxA1A546 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IsxA1A546 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
IsxA1A546 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
IsxA1A546 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.82■□□□□ 0.6
IsxA1A546 Gm11687-201ENSMUST00000118911 886 ntBASIC18.82■□□□□ 0.6
IsxA1A546 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IsxA1A546 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IsxA1A546 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IsxA1A546 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.82■□□□□ 0.6
IsxA1A546 Golph3-205ENSMUST00000228671 2842 ntBASIC18.82■□□□□ 0.6
IsxA1A546 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.81■□□□□ 0.6
IsxA1A546 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IsxA1A546 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
IsxA1A546 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Scarna2-201ENSMUST00000157560 414 ntBASIC18.8■□□□□ 0.6
IsxA1A546 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.8■□□□□ 0.6
IsxA1A546 Gm9806-201ENSMUST00000051080 552 ntBASIC18.8■□□□□ 0.6
IsxA1A546 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
IsxA1A546 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
IsxA1A546 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IsxA1A546 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
IsxA1A546 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
IsxA1A546 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IsxA1A546 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IsxA1A546 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
IsxA1A546 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IsxA1A546 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
IsxA1A546 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
IsxA1A546 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IsxA1A546 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.77■□□□□ 0.6
IsxA1A546 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.77■□□□□ 0.6
IsxA1A546 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.77■□□□□ 0.6
IsxA1A546 Gm45364-201ENSMUST00000210883 159 ntBASIC18.77■□□□□ 0.6
IsxA1A546 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IsxA1A546 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IsxA1A546 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
IsxA1A546 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IsxA1A546 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
IsxA1A546 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
IsxA1A546 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.76■□□□□ 0.59
IsxA1A546 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.76■□□□□ 0.59
IsxA1A546 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms