Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lnp1A0A1B0GSK3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Lnp1A0A1B0GSK3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lnp1A0A1B0GSK3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Etf1-202ENSMUST00000180351 108 ntBASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lnp1A0A1B0GSK3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lnp1A0A1B0GSK3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lnp1A0A1B0GSK3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Gm7417-201ENSMUST00000192950 473 ntBASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lnp1A0A1B0GSK3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lnp1A0A1B0GSK3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lnp1A0A1B0GSK3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lnp1A0A1B0GSK3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lnp1A0A1B0GSK3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lnp1A0A1B0GSK3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lnp1A0A1B0GSK3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lnp1A0A1B0GSK3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lnp1A0A1B0GSK3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lnp1A0A1B0GSK3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms