Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv1-88A0A140T8N1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv1-88A0A140T8N1 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv1-88A0A140T8N1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv1-88A0A140T8N1 Gm5913-201ENSMUST00000119397 1399 ntBASIC13.33□□□□□ -0.27
Igkv1-88A0A140T8N1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv1-88A0A140T8N1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 Gm7332-201ENSMUST00000118351 454 ntBASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.32□□□□□ -0.28
Igkv1-88A0A140T8N1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Gm14523-201ENSMUST00000117260 558 ntBASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Igkv1-88A0A140T8N1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms