Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav23A0A0G2JG17 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav23A0A0G2JG17 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav23A0A0G2JG17 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav23A0A0G2JG17 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav23A0A0G2JG17 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav23A0A0G2JG17 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav23A0A0G2JG17 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.53■□□□□ 0.24
Trav23A0A0G2JG17 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav23A0A0G2JG17 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav23A0A0G2JG17 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.52■□□□□ 0.24
Trav23A0A0G2JG17 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav23A0A0G2JG17 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav23A0A0G2JG17 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav23A0A0G2JG17 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav23A0A0G2JG17 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav23A0A0G2JG17 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav23A0A0G2JG17 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav23A0A0G2JG17 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav23A0A0G2JG17 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav23A0A0G2JG17 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav23A0A0G2JG17 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav23A0A0G2JG17 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav23A0A0G2JG17 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav23A0A0G2JG17 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav23A0A0G2JG17 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav23A0A0G2JG17 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav23A0A0G2JG17 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav23A0A0G2JG17 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav23A0A0G2JG17 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav23A0A0G2JG17 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms