Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv8-28A0A0G2JE47 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv8-28A0A0G2JE47 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv8-28A0A0G2JE47 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv8-28A0A0G2JE47 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv8-28A0A0G2JE47 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv8-28A0A0G2JE47 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv8-28A0A0G2JE47 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Igkv8-28A0A0G2JE47 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Igkv8-28A0A0G2JE47 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igkv8-28A0A0G2JE47 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igkv8-28A0A0G2JE47 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igkv8-28A0A0G2JE47 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Igkv8-28A0A0G2JE47 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Terc-201ENSMUST00000082862 423 ntBASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC12.7□□□□□ -0.38
Igkv8-28A0A0G2JE47 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gm5987-201ENSMUST00000196433 1151 ntBASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gm5913-201ENSMUST00000119397 1399 ntBASIC12.69□□□□□ -0.38
Igkv8-28A0A0G2JE47 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv8-28A0A0G2JE47 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv8-28A0A0G2JE47 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Mir3960-201ENSMUST00000198213 73 ntBASIC12.66□□□□□ -0.38
Igkv8-28A0A0G2JE47 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms