Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-52A0A0A6YXC3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm12922-201ENSMUST00000120626 809 ntBASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-52A0A0A6YXC3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.44■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Gm9847-201ENSMUST00000052528 599 ntBASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-52A0A0A6YXC3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms