Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Gm45444-201ENSMUST00000211394 898 ntBASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav9d-1A0A075B699 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav9d-1A0A075B699 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9d-1A0A075B699 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Gm13238-201ENSMUST00000117655 780 ntBASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9d-1A0A075B699 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.61■□□□□ 0.09
Trav9d-1A0A075B699 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9d-1A0A075B699 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-1A0A075B699 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav9d-1A0A075B699 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav9d-1A0A075B699 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.59■□□□□ 0.09
Trav9d-1A0A075B699 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms