Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav14n-3A0A075B645 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav14n-3A0A075B645 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav14n-3A0A075B645 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav14n-3A0A075B645 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14n-3A0A075B645 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14n-3A0A075B645 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav14n-3A0A075B645 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav14n-3A0A075B645 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav14n-3A0A075B645 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.33■□□□□ 0.04
Trav14n-3A0A075B645 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav14n-3A0A075B645 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav14n-3A0A075B645 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav14n-3A0A075B645 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav14n-3A0A075B645 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav14n-3A0A075B645 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.3■□□□□ 0.04
Trav14n-3A0A075B645 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav14n-3A0A075B645 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Trav14n-3A0A075B645 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14n-3A0A075B645 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav14n-3A0A075B645 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav14n-3A0A075B645 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.27■□□□□ 0.04
Trav14n-3A0A075B645 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.27■□□□□ 0.03
Trav14n-3A0A075B645 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms