Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ska1Q9CPV1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Ska1Q9CPV1 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm13665-201ENSMUST00000120830 528 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Mir8109-201ENSMUST00000184375 117 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm43822-201ENSMUST00000200285 476 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm43966-201ENSMUST00000203301 612 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ska1Q9CPV1 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm24255-201ENSMUST00000104481 128 ntBASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm27320-201ENSMUST00000184892 109 ntBASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ska1Q9CPV1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms