Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm18561-201ENSMUST00000206027 804 ntBASIC10.03□□□□□ -0.8
Scrt1Q99M85 Gm45113-201ENSMUST00000207518 165 ntBASIC10.03□□□□□ -0.8
Scrt1Q99M85 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.03□□□□□ -0.8
Scrt1Q99M85 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Arhgef33-207ENSMUST00000224966 490 ntBASIC10.03□□□□□ -0.8
Scrt1Q99M85 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.03□□□□□ -0.8
Scrt1Q99M85 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.03□□□□□ -0.8
Scrt1Q99M85 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Scrt1Q99M85 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Scrt1Q99M85 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.02□□□□□ -0.8
Scrt1Q99M85 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Scrt1Q99M85 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Scrt1Q99M85 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Scrt1Q99M85 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Scrt1Q99M85 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm13351-201ENSMUST00000118087 414 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm15003-201ENSMUST00000118884 446 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm7719-201ENSMUST00000182374 975 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm38151-201ENSMUST00000195085 289 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm23105-201ENSMUST00000083719 134 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.02□□□□□ -0.81
Scrt1Q99M85 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Scrt1Q99M85 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gm10169-201ENSMUST00000121822 348 ntBASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gm12453-201ENSMUST00000121981 331 ntBASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms