Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Rmrp-201ENSMUST00000157463 271 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Esd-ps-201ENSMUST00000170684 847 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm2991-201ENSMUST00000173338 480 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm27243-201ENSMUST00000183964 521 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm6621-201ENSMUST00000193251 772 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm21769-201ENSMUST00000211922 111 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 AC134439.1-201ENSMUST00000220923 600 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 AC158142.3-201ENSMUST00000226230 675 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdhb3Q91XZ7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm14908-201ENSMUST00000120930 1286 ntBASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm37259-201ENSMUST00000193903 849 ntBASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm44332-201ENSMUST00000203712 433 ntBASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gm17838-201ENSMUST00000205872 876 ntBASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Morn2-202ENSMUST00000227729 656 ntBASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhb3Q91XZ7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms