Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm6755-201ENSMUST00000100598 864 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm6740-201ENSMUST00000100617 864 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm27444-201ENSMUST00000184157 137 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm7255-201ENSMUST00000187371 908 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm5040-201ENSMUST00000218609 800 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm18042-201ENSMUST00000219887 790 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm5278-201ENSMUST00000055957 552 ntBASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.68□□□□□ -0.06
Col16a1Q8BLX7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Gm11919-201ENSMUST00000117609 721 ntBASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Gm3926-201ENSMUST00000223378 1123 ntBASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 AC125409.3-201ENSMUST00000223488 653 ntBASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 CT030035.1-201ENSMUST00000223964 935 ntBASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col16a1Q8BLX7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Gm23132-201ENSMUST00000104254 132 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Gm12463-201ENSMUST00000118271 849 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Gm15031-201ENSMUST00000121341 210 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 AC116797.2-202ENSMUST00000223587 1017 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 AC103672.1-201ENSMUST00000227502 365 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 AC151836.1-201ENSMUST00000228730 1637 ntBASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col16a1Q8BLX7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm25394-201ENSMUST00000157338 133 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms