Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm12857-201ENSMUST00000117678 592 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm15711-201ENSMUST00000118889 535 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Mir8093-201ENSMUST00000185043 137 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm18065-201ENSMUST00000221395 526 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm18212-201ENSMUST00000211678 889 ntBASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm7940-201ENSMUST00000218195 769 ntBASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm8420-201ENSMUST00000097103 598 ntBASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc40Q8BI79 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Gm11663-201ENSMUST00000117888 290 ntBASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Gm14017-201ENSMUST00000121934 386 ntBASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc40Q8BI79 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms