Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gm6439-201ENSMUST00000199849 862 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gm8956-201ENSMUST00000203939 825 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gm45186-201ENSMUST00000206874 478 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdp1Q7TSG2 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Ctdp1Q7TSG2 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Gm3786-201ENSMUST00000202659 378 ntBASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Ctdp1Q7TSG2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms