Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col19a1Q0VF58 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Mir598-201ENSMUST00000102094 79 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm23062-201ENSMUST00000102349 110 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm9095-201ENSMUST00000117607 881 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm9097-201ENSMUST00000120514 880 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm15373-201ENSMUST00000121495 214 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm5526-201ENSMUST00000153604 423 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm8601-201ENSMUST00000182096 909 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm45258-201ENSMUST00000210042 853 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm9619-201ENSMUST00000211587 762 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col19a1Q0VF58 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 AA623943-201ENSMUST00000121794 354 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm42687-201ENSMUST00000199075 164 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm44908-201ENSMUST00000208610 266 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm44917-201ENSMUST00000208798 520 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms