Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hnf4aP49698 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.03□□□□□ -0.64
Hnf4aP49698 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.03□□□□□ -0.64
Hnf4aP49698 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hnf4aP49698 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hnf4aP49698 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hnf4aP49698 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hnf4aP49698 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Hnf4aP49698 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hnf4aP49698 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hnf4aP49698 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Btrc-209ENSMUST00000224478 2194 ntBASIC11.02□□□□□ -0.65
Hnf4aP49698 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Gm14058-201ENSMUST00000116082 735 ntBASIC11.02□□□□□ -0.65
Hnf4aP49698 Gm11941-201ENSMUST00000119904 610 ntBASIC11.02□□□□□ -0.65
Hnf4aP49698 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Gm3150-201ENSMUST00000166418 204 ntBASIC11.02□□□□□ -0.65
Hnf4aP49698 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Mir6927-201ENSMUST00000184494 71 ntBASIC11.02□□□□□ -0.65
Hnf4aP49698 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.02□□□□□ -0.65
Hnf4aP49698 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.02□□□□□ -0.65
Hnf4aP49698 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.02□□□□□ -0.65
Hnf4aP49698 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.02□□□□□ -0.65
Hnf4aP49698 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
Hnf4aP49698 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hnf4aP49698 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hnf4aP49698 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.01□□□□□ -0.65
Hnf4aP49698 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm13809-201ENSMUST00000117921 597 ntBASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm7857-201ENSMUST00000117957 358 ntBASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm8731-201ENSMUST00000118088 412 ntBASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm12463-201ENSMUST00000118271 849 ntBASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm12217-201ENSMUST00000118858 696 ntBASIC11.01□□□□□ -0.65
Hnf4aP49698 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.01□□□□□ -0.65
Hnf4aP49698 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.01□□□□□ -0.65
Hnf4aP49698 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hnf4aP49698 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hnf4aP49698 Gm9540-201ENSMUST00000188230 478 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms