Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RPA3P35244 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.76□□□□□ -0.05
RPA3P35244 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.75□□□□□ -0.05
RPA3P35244 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.75□□□□□ -0.05
RPA3P35244 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.75□□□□□ -0.05
RPA3P35244 KLF2P2-201ENST00000416807 1039 ntBASIC14.75□□□□□ -0.05
RPA3P35244 COX5BP8-201ENST00000416911 349 ntBASIC14.75□□□□□ -0.05
RPA3P35244 NME2P1-201ENST00000426182 414 ntBASIC14.75□□□□□ -0.05
RPA3P35244 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
RPA3P35244 TTTY23B-201ENST00000442790 549 ntBASIC14.75□□□□□ -0.05
RPA3P35244 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 MIR5189-201ENST00000577370 114 ntBASIC14.75□□□□□ -0.05
RPA3P35244 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.75□□□□□ -0.05
RPA3P35244 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
RPA3P35244 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.75□□□□□ -0.05
RPA3P35244 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RPA3P35244 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 LRRC59-203ENST00000576448 1531 ntBASIC14.75□□□□□ -0.05
RPA3P35244 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RPA3P35244 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RPA3P35244 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.75□□□□□ -0.05
RPA3P35244 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPA3P35244 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.74□□□□□ -0.05
RPA3P35244 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.74□□□□□ -0.05
RPA3P35244 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.74□□□□□ -0.05
RPA3P35244 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RPA3P35244 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 TLE1P1-201ENST00000422965 589 ntBASIC14.74□□□□□ -0.05
RPA3P35244 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.74□□□□□ -0.05
RPA3P35244 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.74□□□□□ -0.05
RPA3P35244 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.74□□□□□ -0.05
RPA3P35244 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPA3P35244 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.74□□□□□ -0.05
RPA3P35244 AC132938.2-201ENST00000579188 680 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms