Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm24934-201ENSMUST00000103764 111 ntBASIC8.29□□□□□ -1.08
TcraP01849 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC8.29□□□□□ -1.08
TcraP01849 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
TcraP01849 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC8.29□□□□□ -1.08
TcraP01849 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC8.29□□□□□ -1.08
TcraP01849 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC8.29□□□□□ -1.08
TcraP01849 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC8.29□□□□□ -1.08
TcraP01849 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Gm45784-201ENSMUST00000188360 142 ntBASIC8.29□□□□□ -1.08
TcraP01849 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Gm18711-201ENSMUST00000199341 750 ntBASIC8.29□□□□□ -1.08
TcraP01849 Gm44711-201ENSMUST00000205414 1264 ntBASIC8.29□□□□□ -1.08
TcraP01849 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.29□□□□□ -1.08
TcraP01849 Lect2-202ENSMUST00000225183 823 ntBASIC8.29□□□□□ -1.08
TcraP01849 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TcraP01849 Gm13142-201ENSMUST00000117213 1453 ntBASIC8.29□□□□□ -1.08
TcraP01849 Gm8706-201ENSMUST00000197372 1491 ntBASIC8.29□□□□□ -1.08
TcraP01849 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
TcraP01849 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TcraP01849 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TcraP01849 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TcraP01849 Gm4454-201ENSMUST00000190585 2578 ntBASIC8.28□□□□□ -1.08
TcraP01849 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TcraP01849 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Gm37031-201ENSMUST00000195487 2530 ntBASIC8.28□□□□□ -1.08
TcraP01849 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
TcraP01849 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
TcraP01849 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
TcraP01849 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Gm6023-201ENSMUST00000118217 606 ntBASIC8.28□□□□□ -1.08
TcraP01849 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC8.28□□□□□ -1.08
TcraP01849 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Gm7809-201ENSMUST00000153199 742 ntBASIC8.28□□□□□ -1.08
TcraP01849 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TcraP01849 Gm38241-201ENSMUST00000192641 898 ntBASIC8.28□□□□□ -1.08
TcraP01849 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC8.28□□□□□ -1.08
TcraP01849 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
TcraP01849 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Gm43274-201ENSMUST00000202545 5000 ntBASIC8.28□□□□□ -1.08
TcraP01849 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TcraP01849 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC8.28□□□□□ -1.08
TcraP01849 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TcraP01849 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC8.27□□□□□ -1.08
TcraP01849 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
TcraP01849 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
TcraP01849 Gm10699-201ENSMUST00000098916 2130 ntBASIC8.27□□□□□ -1.08
TcraP01849 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
TcraP01849 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
TcraP01849 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
TcraP01849 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms