Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Mir1941-201ENSMUST00000157834 83 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Snord55-201ENSMUST00000174939 79 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm7445-201ENSMUST00000192115 340 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm43564-201ENSMUST00000196185 211 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm43117-201ENSMUST00000198531 379 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 AC124613.1-201ENSMUST00000198711 88 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm6794-201ENSMUST00000203829 457 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm3283-201ENSMUST00000199319 1350 ntBASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm11473-201ENSMUST00000118980 359 ntBASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm25288-201ENSMUST00000122800 265 ntBASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm28196-201ENSMUST00000187719 640 ntBASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Gm8968-201ENSMUST00000199133 1303 ntBASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx54Q8K4L0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm15626-201ENSMUST00000117478 868 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm12028-201ENSMUST00000118065 436 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm11380-201ENSMUST00000118067 560 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm14829-201ENSMUST00000121499 1138 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Olfml3-204ENSMUST00000169286 874 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm17782-201ENSMUST00000174345 880 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm19927-201ENSMUST00000185792 781 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms