Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Spg11Q3UHA3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Gm13377-201ENSMUST00000137984 683 ntBASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Gm20495-201ENSMUST00000173902 235 ntBASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Spg11Q3UHA3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm14571-201ENSMUST00000118292 570 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm18859-201ENSMUST00000118792 825 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm13688-201ENSMUST00000121557 608 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm7456-201ENSMUST00000182862 1011 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm5259-201ENSMUST00000191231 800 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm18299-201ENSMUST00000192026 636 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Spg11Q3UHA3 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms