Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxc4Q08624 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hoxc4Q08624 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.96□□□□□ -0.66
Hoxc4Q08624 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.96□□□□□ -0.66
Hoxc4Q08624 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hoxc4Q08624 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Snord17-201ENSMUST00000104526 238 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm24248-201ENSMUST00000157321 322 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm18776-201ENSMUST00000188833 654 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm7082-201ENSMUST00000209880 969 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.95□□□□□ -0.66
Hoxc4Q08624 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hoxc4Q08624 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Mir1905-201ENSMUST00000122779 82 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm25343-201ENSMUST00000157460 107 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm16030-201ENSMUST00000159098 603 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hoxc4Q08624 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm45120-201ENSMUST00000208880 408 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm9102-201ENSMUST00000219250 465 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hoxc4Q08624 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.94□□□□□ -0.66
Hoxc4Q08624 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms