Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Msx2Q03358 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Msx2Q03358 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.02□□□□□ -0.65
Msx2Q03358 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.02□□□□□ -0.65
Msx2Q03358 Gm28937-201ENSMUST00000185413 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm29400-201ENSMUST00000187208 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm28662-201ENSMUST00000188446 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm28251-201ENSMUST00000188835 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm37318-201ENSMUST00000194325 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm38017-201ENSMUST00000194768 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm37287-201ENSMUST00000195449 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Gm37793-201ENSMUST00000195548 695 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Gm18515-201ENSMUST00000219755 797 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.02□□□□□ -0.65
Msx2Q03358 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Msx2Q03358 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.02□□□□□ -0.65
Msx2Q03358 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Msx2Q03358 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Gm5187-201ENSMUST00000117317 991 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Gm3329-201ENSMUST00000159873 556 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Gm38002-201ENSMUST00000193255 180 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Gm5982-201ENSMUST00000196234 512 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Msx2Q03358 Gm45880-201ENSMUST00000213041 853 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Gzmn-202ENSMUST00000225535 989 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Gm9823-201ENSMUST00000051212 327 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.01□□□□□ -0.65
Msx2Q03358 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.01□□□□□ -0.65
Msx2Q03358 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Msx2Q03358 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.01□□□□□ -0.65
Msx2Q03358 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Msx2Q03358 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Msx2Q03358 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Msx2Q03358 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Msx2Q03358 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Msx2Q03358 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11□□□□□ -0.65
Msx2Q03358 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Msx2Q03358 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms