Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.35□□□□□ -0.43
CiitaP79621 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.35□□□□□ -0.43
CiitaP79621 Gm22846-201ENSMUST00000157706 270 ntBASIC12.35□□□□□ -0.43
CiitaP79621 Gm6407-201ENSMUST00000176468 549 ntBASIC12.35□□□□□ -0.43
CiitaP79621 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.35□□□□□ -0.43
CiitaP79621 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.35□□□□□ -0.43
CiitaP79621 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.35□□□□□ -0.43
CiitaP79621 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.35□□□□□ -0.43
CiitaP79621 Gm5599-201ENSMUST00000209602 788 ntBASIC12.35□□□□□ -0.43
CiitaP79621 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.35□□□□□ -0.43
CiitaP79621 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CiitaP79621 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CiitaP79621 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CiitaP79621 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CiitaP79621 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CiitaP79621 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CiitaP79621 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.34□□□□□ -0.43
CiitaP79621 Gm12795-201ENSMUST00000117594 539 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.34□□□□□ -0.43
CiitaP79621 Gm13117-201ENSMUST00000120894 691 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.34□□□□□ -0.43
CiitaP79621 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.34□□□□□ -0.43
CiitaP79621 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Gm25072-201ENSMUST00000175233 235 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Gm44323-201ENSMUST00000198689 129 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Mt1-202ENSMUST00000211807 1085 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CiitaP79621 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CiitaP79621 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CiitaP79621 Gm8420-201ENSMUST00000097103 598 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.34□□□□□ -0.43
CiitaP79621 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CiitaP79621 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CiitaP79621 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.34□□□□□ -0.43
CiitaP79621 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.34□□□□□ -0.43
CiitaP79621 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CiitaP79621 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CiitaP79621 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms