Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm45856-201ENSMUST00000212752 416 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm6P62313 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.03□□□□□ -0.8
Lsm6P62313 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.03□□□□□ -0.8
Lsm6P62313 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lsm6P62313 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm6P62313 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm6P62313 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.02□□□□□ -0.8
Lsm6P62313 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm6P62313 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lsm6P62313 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.02□□□□□ -0.8
Lsm6P62313 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.02□□□□□ -0.8
Lsm6P62313 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Lsm6P62313 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm23200-201ENSMUST00000104379 132 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Gm14193-201ENSMUST00000105067 153 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Lsm6P62313 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm44506-201ENSMUST00000206278 965 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Gm7848-201ENSMUST00000210739 718 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Gm5369-201ENSMUST00000217499 588 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.02□□□□□ -0.81
Lsm6P62313 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Lsm6P62313 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.02□□□□□ -0.81
Lsm6P62313 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Lsm6P62313 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lsm6P62313 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.02□□□□□ -0.81
Lsm6P62313 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.01□□□□□ -0.81
Lsm6P62313 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Lsm6P62313 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.01□□□□□ -0.81
Lsm6P62313 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.01□□□□□ -0.81
Lsm6P62313 Gm15236-201ENSMUST00000117309 379 ntBASIC10.01□□□□□ -0.81
Lsm6P62313 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.01□□□□□ -0.81
Lsm6P62313 Gm12997-201ENSMUST00000120207 640 ntBASIC10.01□□□□□ -0.81
Lsm6P62313 Gm15595-201ENSMUST00000120840 961 ntBASIC10.01□□□□□ -0.81
Lsm6P62313 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.01□□□□□ -0.81
Lsm6P62313 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.01□□□□□ -0.81
Lsm6P62313 Gm24844-201ENSMUST00000158679 127 ntBASIC10.01□□□□□ -0.81
Lsm6P62313 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.01□□□□□ -0.81
Lsm6P62313 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Lsm6P62313 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms