Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Pde6aP27664 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6aP27664 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.2□□□□□ -0.3
Pde6aP27664 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pde6aP27664 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pde6aP27664 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pde6aP27664 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.2□□□□□ -0.3
Pde6aP27664 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6aP27664 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pde6aP27664 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.2□□□□□ -0.3
Pde6aP27664 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6aP27664 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6aP27664 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.2□□□□□ -0.3
Pde6aP27664 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6aP27664 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pde6aP27664 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Pde6aP27664 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pde6aP27664 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pde6aP27664 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.19□□□□□ -0.3
Pde6aP27664 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Pde6aP27664 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Gm22846-201ENSMUST00000157706 270 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 Gm22334-201ENSMUST00000158070 133 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 Gm19459-201ENSMUST00000176240 835 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 Gm44126-201ENSMUST00000204831 514 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Gm10179-201ENSMUST00000086233 688 ntBASIC13.19□□□□□ -0.3
Pde6aP27664 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pde6aP27664 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6aP27664 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6aP27664 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.18□□□□□ -0.3
Pde6aP27664 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.18□□□□□ -0.3
Pde6aP27664 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.18□□□□□ -0.3
Pde6aP27664 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.18□□□□□ -0.3
Pde6aP27664 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms