Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10□□□□□ -0.81
P04224 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Gm6714-201ENSMUST00000218677 2330 ntBASIC10□□□□□ -0.81
P04224 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10□□□□□ -0.81
P04224 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10□□□□□ -0.81
P04224 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
P04224 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
P04224 Gm19221-201ENSMUST00000221827 1477 ntBASIC10□□□□□ -0.81
P04224 Gm10434-201ENSMUST00000101158 471 ntBASIC10□□□□□ -0.81
P04224 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10□□□□□ -0.81
P04224 Gm11658-201ENSMUST00000120913 1008 ntBASIC10□□□□□ -0.81
P04224 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Rprl1-201ENSMUST00000158050 327 ntBASIC10□□□□□ -0.81
P04224 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10□□□□□ -0.81
P04224 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10□□□□□ -0.81
P04224 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10□□□□□ -0.81
P04224 Gm2467-201ENSMUST00000182266 1010 ntBASIC10□□□□□ -0.81
P04224 Gm6981-201ENSMUST00000182467 1008 ntBASIC10□□□□□ -0.81
P04224 Gm8602-201ENSMUST00000184045 607 ntBASIC10□□□□□ -0.81
P04224 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10□□□□□ -0.81
P04224 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10□□□□□ -0.81
P04224 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
P04224 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10□□□□□ -0.81
P04224 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
P04224 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10□□□□□ -0.81
P04224 Erich3-203ENSMUST00000189969 3460 ntBASIC10□□□□□ -0.81
P04224 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
P04224 Gm37131-201ENSMUST00000192502 1561 ntBASIC10□□□□□ -0.81
P04224 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
P04224 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
P04224 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
P04224 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.99□□□□□ -0.81
P04224 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.99□□□□□ -0.81
P04224 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
P04224 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
P04224 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
P04224 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.99□□□□□ -0.81
P04224 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
P04224 Gm11700-201ENSMUST00000119409 403 ntBASIC9.99□□□□□ -0.81
P04224 Gm4986-201ENSMUST00000119731 549 ntBASIC9.99□□□□□ -0.81
P04224 Gm15610-201ENSMUST00000120584 195 ntBASIC9.99□□□□□ -0.81
P04224 Gm13316-201ENSMUST00000140537 691 ntBASIC9.99□□□□□ -0.81
P04224 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
P04224 Gm2546-201ENSMUST00000182630 991 ntBASIC9.99□□□□□ -0.81
P04224 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.99□□□□□ -0.81
P04224 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.99□□□□□ -0.81
P04224 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Gm6266-201ENSMUST00000203844 806 ntBASIC9.99□□□□□ -0.81
P04224 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.99□□□□□ -0.81
P04224 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.99□□□□□ -0.81
P04224 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.99□□□□□ -0.81
P04224 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
P04224 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms