Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm6222-202ENSMUST00000182143 629 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm9192-201ENSMUST00000183221 985 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm18187-201ENSMUST00000196476 984 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim42Q9D2H5 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm10434-201ENSMUST00000101158 471 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm17150-201ENSMUST00000165577 381 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm19287-201ENSMUST00000203190 358 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm18377-201ENSMUST00000215141 607 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim42Q9D2H5 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms