Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm15036-201ENSMUST00000118880 400 ntBASIC13.26□□□□□ -0.29
Smc1bQ920F6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.26□□□□□ -0.29
Smc1bQ920F6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm5805-201ENSMUST00000072779 456 ntBASIC13.26□□□□□ -0.29
Smc1bQ920F6 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm24844-201ENSMUST00000158679 127 ntBASIC13.25□□□□□ -0.29
Smc1bQ920F6 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm18204-201ENSMUST00000209835 793 ntBASIC13.25□□□□□ -0.29
Smc1bQ920F6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm4604-201ENSMUST00000025040 390 ntBASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.25□□□□□ -0.29
Smc1bQ920F6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smc1bQ920F6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.24□□□□□ -0.29
Smc1bQ920F6 Gm18367-201ENSMUST00000176139 600 ntBASIC13.24□□□□□ -0.29
Smc1bQ920F6 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms