Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm12247-201ENSMUST00000117585 670 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm12407-201ENSMUST00000180219 324 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm8342-201ENSMUST00000209839 757 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm7848-201ENSMUST00000210739 718 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm1821-202ENSMUST00000227415 750 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trim29Q8R2Q0 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm9540-201ENSMUST00000188230 478 ntBASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim29Q8R2Q0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim29Q8R2Q0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms