Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx54Q8K4L0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx54Q8K4L0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx54Q8K4L0 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx54Q8K4L0 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC14.92□□□□□ -0.02
Ddx54Q8K4L0 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.92□□□□□ -0.02
Ddx54Q8K4L0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm11952-201ENSMUST00000121172 821 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm7805-201ENSMUST00000154348 448 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm6291-201ENSMUST00000179994 309 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 AC154461.1-201ENSMUST00000224207 1005 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm7589-201ENSMUST00000085631 534 ntBASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx54Q8K4L0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm12745-201ENSMUST00000121767 214 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm7928-201ENSMUST00000181249 701 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm43966-201ENSMUST00000203301 612 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm9644-201ENSMUST00000212828 1183 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm18065-201ENSMUST00000221395 526 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm10020-201ENSMUST00000081993 612 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx54Q8K4L0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx54Q8K4L0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms