Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Gm43761-201ENSMUST00000202132 991 ntBASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Gm16410-201ENSMUST00000094550 774 ntBASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Gm12904-201ENSMUST00000117451 1399 ntBASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Gm5822-201ENSMUST00000161562 1378 ntBASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Gm19027-201ENSMUST00000187291 1355 ntBASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpn1Q8CCS6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gm44942-201ENSMUST00000096093 2072 ntBASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gm37486-201ENSMUST00000195663 405 ntBASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gm43965-201ENSMUST00000203779 789 ntBASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpn1Q8CCS6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Gm11929-201ENSMUST00000118175 945 ntBASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Gm12362-201ENSMUST00000121986 342 ntBASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Gm22994-201ENSMUST00000175422 82 ntBASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 AC156561.1-201ENSMUST00000224774 233 ntBASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 AC163038.2-201ENSMUST00000224851 650 ntBASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpn1Q8CCS6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpn1Q8CCS6 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms