Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srrm3Q80WV7 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm29155-201ENSMUST00000185910 269 ntBASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm4607-201ENSMUST00000206649 577 ntBASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm8285-201ENSMUST00000208293 759 ntBASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.95□□□□□ -0.5
Srrm3Q80WV7 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srrm3Q80WV7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm14999-201ENSMUST00000121039 624 ntBASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm12164-201ENSMUST00000121695 551 ntBASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm19994-201ENSMUST00000217086 586 ntBASIC11.94□□□□□ -0.5
Srrm3Q80WV7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.94□□□□□ -0.5
Srrm3Q80WV7 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.94□□□□□ -0.5
Srrm3Q80WV7 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srrm3Q80WV7 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.93□□□□□ -0.5
Srrm3Q80WV7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.93□□□□□ -0.5
Srrm3Q80WV7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Srrm3Q80WV7 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Srrm3Q80WV7 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms