Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.34□□□□□ -0.91
Trim63Q38HM4 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim63Q38HM4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.34□□□□□ -0.91
Trim63Q38HM4 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim63Q38HM4 AC165080.1-201ENSMUST00000215257 3123 ntBASIC9.34□□□□□ -0.92
Trim63Q38HM4 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Gm38215-201ENSMUST00000192321 2233 ntBASIC9.33□□□□□ -0.92
Trim63Q38HM4 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.33□□□□□ -0.92
Trim63Q38HM4 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 AC153940.1-201ENSMUST00000220149 5300 ntBASIC9.33□□□□□ -0.92
Trim63Q38HM4 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.33□□□□□ -0.92
Trim63Q38HM4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.33□□□□□ -0.92
Trim63Q38HM4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.33□□□□□ -0.92
Trim63Q38HM4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Arhgap19-201ENSMUST00000026150 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim63Q38HM4 Gm43820-201ENSMUST00000199414 3346 ntBASIC9.33□□□□□ -0.92
Trim63Q38HM4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.32□□□□□ -0.92
Trim63Q38HM4 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim63Q38HM4 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms