Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Znf541Q0GGX2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Znf541Q0GGX2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Znf541Q0GGX2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Gm25072-201ENSMUST00000175233 235 ntBASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Gm27441-201ENSMUST00000185000 105 ntBASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Znf541Q0GGX2 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Mir453-201ENSMUST00000104732 82 ntBASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.32□□□□□ -0.12
Znf541Q0GGX2 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Gm38321-201ENSMUST00000195053 235 ntBASIC14.32□□□□□ -0.12
Znf541Q0GGX2 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.32□□□□□ -0.12
Znf541Q0GGX2 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Znf541Q0GGX2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Znf541Q0GGX2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms