Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col8a2P25318 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col8a2P25318 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.51□□□□□ -0.89
Col8a2P25318 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm26013-201ENSMUST00000104404 119 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm13422-201ENSMUST00000118834 504 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm11451-201ENSMUST00000118946 630 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm14395-201ENSMUST00000120494 563 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm21778-201ENSMUST00000178779 471 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Mir6998-201ENSMUST00000183343 64 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm37028-201ENSMUST00000194276 107 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm43163-201ENSMUST00000196571 442 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm43002-201ENSMUST00000200310 155 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm45594-201ENSMUST00000211717 241 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm30671-201ENSMUST00000214898 318 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Col8a2P25318 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Col8a2P25318 Gm13384-201ENSMUST00000117166 1344 ntBASIC9.51□□□□□ -0.89
Col8a2P25318 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col8a2P25318 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.5□□□□□ -0.89
Col8a2P25318 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Col8a2P25318 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC9.5□□□□□ -0.89
Col8a2P25318 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Col8a2P25318 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col8a2P25318 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.5□□□□□ -0.89
Col8a2P25318 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col8a2P25318 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC9.5□□□□□ -0.89
Col8a2P25318 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.5□□□□□ -0.89
Col8a2P25318 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms