Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm12151-201ENSMUST00000121374 290 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Gm11594-201ENSMUST00000122313 162 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.28□□□□□ -0.92
Sdc1P18828 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm18624-201ENSMUST00000220966 658 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Sdc1P18828 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Sdc1P18828 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.28□□□□□ -0.92
Sdc1P18828 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sdc1P18828 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sdc1P18828 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Sdc1P18828 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.92
Sdc1P18828 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Sdc1P18828 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Sdc1P18828 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Sdc1P18828 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Sdc1P18828 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.27□□□□□ -0.93
Sdc1P18828 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sdc1P18828 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Sdc1P18828 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Sdc1P18828 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Sdc1P18828 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Sdc1P18828 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Sdc1P18828 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.27□□□□□ -0.93
Sdc1P18828 Gm7287-201ENSMUST00000205267 602 ntBASIC9.27□□□□□ -0.93
Sdc1P18828 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.27□□□□□ -0.93
Sdc1P18828 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.27□□□□□ -0.93
Sdc1P18828 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.27□□□□□ -0.93
Sdc1P18828 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Sdc1P18828 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Sdc1P18828 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.27□□□□□ -0.93
Sdc1P18828 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sdc1P18828 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.27□□□□□ -0.93
Sdc1P18828 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sdc1P18828 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms