Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Fv4P11370 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Fv4P11370 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Fv4P11370 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.02□□□□□ -0.64
Fv4P11370 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Fv4P11370 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Fv4P11370 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Fv4P11370 Gm12579-201ENSMUST00000118040 783 ntBASIC11.02□□□□□ -0.65
Fv4P11370 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Gm23085-201ENSMUST00000157849 293 ntBASIC11.02□□□□□ -0.65
Fv4P11370 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Fv4P11370 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
Fv4P11370 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Fv4P11370 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Fv4P11370 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Fv4P11370 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.02□□□□□ -0.65
Fv4P11370 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Fv4P11370 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Fv4P11370 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fv4P11370 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Fv4P11370 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Fv4P11370 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Fv4P11370 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.01□□□□□ -0.65
Fv4P11370 Gm12501-201ENSMUST00000119163 529 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Gm8199-201ENSMUST00000121323 823 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Fv4P11370 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Fv4P11370 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.01□□□□□ -0.65
Fv4P11370 Gm45856-201ENSMUST00000212752 416 ntBASIC11.01□□□□□ -0.65
Fv4P11370 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Gm21811-201ENSMUST00000096485 930 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Fv4P11370 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Fv4P11370 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.01□□□□□ -0.65
Fv4P11370 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Fv4P11370 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Fv4P11370 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Fv4P11370 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.01□□□□□ -0.65
Fv4P11370 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fv4P11370 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Fv4P11370 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fv4P11370 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms