Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.27□□□□□ -0.61
Hoxa4P06798 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm13422-201ENSMUST00000118834 504 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm37905-201ENSMUST00000195310 341 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.26□□□□□ -0.61
Hoxa4P06798 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Hoxa4P06798 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hoxa4P06798 Rgr-203ENSMUST00000225070 4704 ntBASIC11.26□□□□□ -0.61
Hoxa4P06798 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.25□□□□□ -0.61
Hoxa4P06798 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Mir7051-201ENSMUST00000184167 73 ntBASIC11.25□□□□□ -0.61
Hoxa4P06798 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Gm5051-201ENSMUST00000204085 485 ntBASIC11.25□□□□□ -0.61
Hoxa4P06798 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa4P06798 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.25□□□□□ -0.61
Hoxa4P06798 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hoxa4P06798 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa4P06798 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms