Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4Q99P72 Gm43417-201ENSMUST00000201586 5207 ntBASIC15.46■□□□□ 0.07
Rtn4Q99P72 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4Q99P72 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4Q99P72 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rtn4Q99P72 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4Q99P72 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4Q99P72 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4Q99P72 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Rtn4Q99P72 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Rtn4Q99P72 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm43771-201ENSMUST00000202931 1578 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm38309-201ENSMUST00000192063 1518 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm13296-201ENSMUST00000117854 997 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm8234-201ENSMUST00000198523 1107 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm5307-201ENSMUST00000204772 760 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm45510-201ENSMUST00000210059 638 ntTSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 AC163664.1-201ENSMUST00000226251 1248 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 AC121542.1-201ENSMUST00000227245 721 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 AC132833.3-201ENSMUST00000227472 866 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gm4863-201ENSMUST00000196907 1381 ntBASIC15.45■□□□□ 0.06
Rtn4Q99P72 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rtn4Q99P72 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm14465-201ENSMUST00000120603 567 ntBASIC15.44■□□□□ 0.06
Rtn4Q99P72 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm27817-201ENSMUST00000184302 233 ntBASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 AC154419.1-201ENSMUST00000227627 272 ntBASIC15.44■□□□□ 0.06
Rtn4Q99P72 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rtn4Q99P72 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms