Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm18065-201ENSMUST00000221395 526 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Gm43117-201ENSMUST00000198531 379 ntBASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Gm44640-201ENSMUST00000206894 247 ntBASIC12.19□□□□□ -0.46
Col19a1Q0VF58 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.19□□□□□ -0.46
Col19a1Q0VF58 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.19□□□□□ -0.46
Col19a1Q0VF58 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col19a1Q0VF58 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gm17782-201ENSMUST00000174345 880 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 BB187690-201ENSMUST00000198619 1176 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gm44605-201ENSMUST00000206892 949 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gm5040-201ENSMUST00000218609 800 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms