Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.21□□□□□ -0.77
P06344 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.21□□□□□ -0.77
P06344 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Gm25076-201ENSMUST00000104098 132 ntBASIC10.21□□□□□ -0.77
P06344 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
P06344 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Gm12419-201ENSMUST00000116649 636 ntBASIC10.21□□□□□ -0.77
P06344 Gm13888-201ENSMUST00000119148 422 ntBASIC10.21□□□□□ -0.77
P06344 Gm16071-201ENSMUST00000119589 793 ntBASIC10.21□□□□□ -0.77
P06344 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.21□□□□□ -0.77
P06344 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.21□□□□□ -0.77
P06344 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.21□□□□□ -0.77
P06344 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.21□□□□□ -0.77
P06344 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.21□□□□□ -0.77
P06344 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.21□□□□□ -0.77
P06344 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.21□□□□□ -0.77
P06344 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Gm23771-201ENSMUST00000178702 110 ntBASIC10.21□□□□□ -0.77
P06344 Gm17826-201ENSMUST00000189720 798 ntBASIC10.21□□□□□ -0.77
P06344 Gm3551-201ENSMUST00000190750 664 ntBASIC10.21□□□□□ -0.77
P06344 Gm9645-201ENSMUST00000197131 792 ntBASIC10.21□□□□□ -0.77
P06344 Gm43002-201ENSMUST00000200310 155 ntBASIC10.21□□□□□ -0.77
P06344 Gm8574-201ENSMUST00000203207 924 ntBASIC10.21□□□□□ -0.77
P06344 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
P06344 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.21□□□□□ -0.77
P06344 Gm8342-201ENSMUST00000209839 757 ntBASIC10.21□□□□□ -0.77
P06344 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.21□□□□□ -0.77
P06344 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.21□□□□□ -0.77
P06344 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
P06344 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
P06344 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
P06344 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
P06344 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
P06344 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
P06344 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
P06344 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
P06344 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.21□□□□□ -0.78
P06344 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.21□□□□□ -0.78
P06344 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
P06344 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P06344 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
P06344 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
P06344 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
P06344 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.2□□□□□ -0.78
P06344 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.2□□□□□ -0.78
P06344 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.2□□□□□ -0.78
P06344 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
P06344 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.2□□□□□ -0.78
P06344 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Gm14071-201ENSMUST00000117817 509 ntBASIC10.2□□□□□ -0.78
P06344 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
P06344 Gm11244-201ENSMUST00000121243 237 ntBASIC10.2□□□□□ -0.78
P06344 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.2□□□□□ -0.78
P06344 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.2□□□□□ -0.78
P06344 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.2□□□□□ -0.78
P06344 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
P06344 Gm7741-201ENSMUST00000181445 989 ntBASIC10.2□□□□□ -0.78
P06344 Gm27910-201ENSMUST00000185004 107 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms