Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Rnf13O54965 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rnf13O54965 Gm14071-201ENSMUST00000117817 509 ntBASIC10.35□□□□□ -0.75
Rnf13O54965 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.35□□□□□ -0.75
Rnf13O54965 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rnf13O54965 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.35□□□□□ -0.75
Rnf13O54965 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.35□□□□□ -0.75
Rnf13O54965 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.35□□□□□ -0.75
Rnf13O54965 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.35□□□□□ -0.75
Rnf13O54965 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.35□□□□□ -0.75
Rnf13O54965 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.35□□□□□ -0.75
Rnf13O54965 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rnf13O54965 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.34□□□□□ -0.75
Rnf13O54965 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
Rnf13O54965 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rnf13O54965 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm12463-201ENSMUST00000118271 849 ntBASIC10.34□□□□□ -0.75
Rnf13O54965 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.34□□□□□ -0.75
Rnf13O54965 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Rnf13O54965 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm32999-201ENSMUST00000192693 562 ntBASIC10.34□□□□□ -0.75
Rnf13O54965 Rprl1-202ENSMUST00000198476 238 ntBASIC10.34□□□□□ -0.75
Rnf13O54965 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm44651-201ENSMUST00000207343 372 ntBASIC10.34□□□□□ -0.75
Rnf13O54965 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.34□□□□□ -0.75
Rnf13O54965 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.34□□□□□ -0.75
Rnf13O54965 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.34□□□□□ -0.75
Rnf13O54965 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf13O54965 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf13O54965 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms